Attribute: linkCode
code ('name') for link. The following naming convention is used:
The linkCode is the same as the name of the boundChemAtom. E.g. a cysteine disulfide link will have linkCode 'SG'. The first exception is the case where there is more than one link starting at the same atom - here the linkCodes are the name of the first linkAtom followed by '_1', '_2'. E.g. an atom CX with three links starting from it will have linkEnds with linkCodes CX_1, CX_2, CX_3. If two different atom subtypes both have a link, the linkCodes are of the same form - there are no fixed rules for how to apportion the various suffixes. Another exception is the 'prev' and 'next' that form the backbone of linear polymers.
guid:
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www.ccpn.ac.uk_Fogh_2006-08-16-18:23:25_00024
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Model Type:
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Word
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Implementation Type:
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String
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Multiplicity:
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1..1
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Changeability:
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frozen
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isDerived:
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False
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isAutomatic:
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False
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isImplementation:
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False
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isImplicit:
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False
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isAbstract:
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False
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Scope:
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instance_level
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Default Value:
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None
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Constraints:
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None
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