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file | basic.h [code] |
| Functions and data structures for constraining secondary structure predictions and evaluation.
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file | hard.h [code] |
| Functions and data structures for handling of secondary structure hard constraints.
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file | ligand.h [code] |
| Functions for incorporation of ligands binding to hairpin and interior loop motifs using the soft constraints framework.
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file | SHAPE.h [code] |
| This module provides function to incorporate SHAPE reactivity data into the folding recursions by means of soft constraints.
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file | soft.h [code] |
| Functions and data structures for secondary structure soft constraints.
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