Last updated on 2024-06-11 16:49:41 CEST.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| CpGassoc | 1 | 9 | 3 |
Current CRAN status: ERROR: 1, NOTE: 9, OK: 3
Version: 2.60
Check: Rd files
Result: NOTE
checkRd: (-1) Sample.data.Rd:11: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sample.data.Rd:12: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sample.data.Rd:13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sample.data.Rd:19: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sample.data.Rd:20: Lost braces in \itemize; meant \describe ?
checkRd: (-1) Sample.data.Rd:21: Lost braces in \itemize; meant \describe ?
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 2.60
Check: examples
Result: ERROR
Running examples in 'CpGassoc-Ex.R' failed
The error most likely occurred in:
> ### Name: CpGassoc-package
> ### Title: Association Between Methylation and a Phenotype of Interest
> ### Aliases: CpGassoc-package CpGassoc
> ### Keywords: package
>
> ### ** Examples
>
> ###NOTE: If you are dealing with large data, do not specify large.data=FALSE.
> ###The default option is true
> ##This will involve partitioning up the data and performing more gc() to clear up space
> ##Using cpg.assoc:
> data(samplecpg,samplepheno,package="CpGassoc")
Warning in readChar(con, 5L, useBytes = TRUE) :
lzma decoder needed more memory
Error in load(file, envir = tmp_env) : empty (zero-byte) input file
Calls: data -> load
Execution halted
Flavor: r-devel-windows-x86_64
Version: 2.60
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'CpGassoc.Rnw' using Sweave
Loading required package: nlme
Warning in readChar(con, 5L, useBytes = TRUE) :
lzma decoder needed more memory
Error: processing vignette 'CpGassoc.Rnw' failed with diagnostics:
chunk 2
Error in load(file, envir = tmp_env) : empty (zero-byte) input file
--- failed re-building 'CpGassoc.Rnw'
SUMMARY: processing the following file failed:
'CpGassoc.Rnw'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64