Last updated on 2024-06-10 14:56:17 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.6 | 4.97 | 171.40 | 176.37 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0.6 | 5.33 | 117.51 | 122.84 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.0.6 | 199.19 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.6 | 224.80 | NOTE | |||
| r-devel-windows-x86_64 | 1.0.6 | 7.00 | 148.00 | 155.00 | ERROR | |
| r-patched-linux-x86_64 | 1.0.6 | 7.74 | 156.25 | 163.99 | NOTE | |
| r-release-linux-x86_64 | 1.0.6 | 5.77 | 158.33 | 164.10 | NOTE | |
| r-release-macos-arm64 | 1.0.6 | 35.00 | NOTE | |||
| r-release-macos-x86_64 | 1.0.6 | 149.00 | NOTE | |||
| r-release-windows-x86_64 | 1.0.6 | 8.00 | 169.00 | 177.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.0.6 | 34.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.0.6 | 57.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.0.6 | 9.00 | 175.00 | 184.00 | OK |
Version: 1.0.6
Check: Rd files
Result: NOTE
checkRd: (-1) runContrasts.Rd:79: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:80: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:81: Lost braces in \itemize; meant \describe ?
checkRd: (-1) runContrasts.Rd:82: Lost braces in \itemize; meant \describe ?
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 1.0.6
Check: tests
Result: ERROR
Running 'testthat.R' [102s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(DGEobj.utils)
>
> test_check("DGEobj.utils")
Loading required package: DGEobj
Loading required package: statmod
Loading required package: RNASeqPower
Loading required package: edgeR
Loading required package: limma
Number of significant surrogate variables is: 11
Iteration (out of 5 ):1 2 3 4 5 Number of significant surrogate variables is: 10
Iteration (out of 5 ):1 2 3 4 5 Number of significant surrogate variables is: 43
Iteration (out of 5 ):Error in brio::read_lines(path) : Allocation of size 1048576 failed
Calls: test_check ... doTryCatch -> lapply -> FUN -> source_file -> <Anonymous>
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.0.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'DGEobj.utils_Workflow.Rmd' using rmarkdown
pandoc.exe: osCommitMemory: VirtualAlloc MEM_COMMIT failed to commit 1048576 bytes of memory (error code: 1455): Die Auslagerungsdatei ist zu klein, um diesen Vorgang durchzuf<fc>hren.
Error: processing vignette 'DGEobj.utils_Workflow.Rmd' failed with diagnostics:
pandoc document conversion failed with error 251
--- failed re-building 'DGEobj.utils_Workflow.Rmd'
SUMMARY: processing the following file failed:
'DGEobj.utils_Workflow.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.0.6
Check: PDF version of manual
Result: WARN
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
Flavor: r-devel-windows-x86_64
Version: 1.0.6
Check: PDF version of manual without index
Result: ERROR
Re-running with no redirection of stdout/stderr.
Flavor: r-devel-windows-x86_64
Version: 1.0.6
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘zFPKM’
Flavor: r-release-macos-arm64
Version: 1.0.6
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'IHW', 'RNASeqPower', 'zFPKM'
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64